Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_3196746_3202301_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3196746 - 3202301

Intron Length:

5556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCTATTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

TCCTGTTCTATT

Flanking Amino Acid:

YFWLQDFVPTSVFFFGAILV

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

0.45

0.9

67.6

25.3

Major PPT

75.1

0.57

0.9

74.1

35.7

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

42.7

-0.4

2.1

59.02

Associated Gene:

Gene:

SLC35A3

Ensembl Gene ID:

ENSAPLG00000014199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039062

3180158 - 3202650

22493

ENSAPLT00000014822

3187011 - 3202650

15640