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Intron Name: Anas_platyrhynchos_platyrhynchos_8_31997576_31998296_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

31997576 - 31998296

Intron Length:

721

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGGGAGTC

5'SS Class:

weak_major

3'SS Sequence:

TGTATGAAAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTGTATGAAAA

Flanking Amino Acid:

GQEKGLLPLLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.4

0.2

1.1

54.4

37.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

48.8

-0

1.2

46.9

43.2

Minor 5ss

30.3

-2.2

3.7

46.2

43.5

Minor BPS

48.6

-0.1

1.9

66.49

39.4

Associated Gene:

Gene:

LHX8

Ensembl Gene ID:

ENSAPLG00000012727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022093

31997571 - 32006141

8571