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Intron Name: Anas_platyrhynchos_platyrhynchos_8_31998498_32000033_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31998498 - 32000033

Intron Length:

1536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATATCAT

5'SS Class:

major

3'SS Sequence:

CCTTTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAG

U12 Branch Point Sequence:

GTGTCTGAGATT

Flanking Amino Acid:

KDIFCKLDYFRRYGTRCSRC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

37.8

Major BPS

63.7

0.34

1.5

63.4

Major PPT

85.1

0.79

0.8

79.6

32.3

Minor 5ss

41.3

-1

58.1

46.5

Minor BPS

43.8

-0.4

2.2

62.51

42.8

Associated Gene:

Gene:

LHX8

Ensembl Gene ID:

ENSAPLG00000012727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022093

31997571 - 32006141

8571

ENSAPLT00000013253

31997054 - 32006141

9088