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Intron Name: Anas_platyrhynchos_platyrhynchos_8_32000827_32003826_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32000827 - 32003826

Intron Length:

3000

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

AATCTCTTATCT

Flanking Amino Acid:

RTSFTADQLQVMQAQFAQDN

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

30.7

Major BPS

84.4

0.85

1.1

34.5

Major PPT

93.1

0.97

0.6

91.8

Minor 5ss

32.3

-2

3.2

41.6

Minor BPS

62.7

0.48

1.6

77.01

Associated Gene:

Gene:

LHX8

Ensembl Gene ID:

ENSAPLG00000012727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022093

31997571 - 32006141

8571

ENSAPLT00000013253

31997054 - 32006141

9088