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Intron Name: Anas_platyrhynchos_platyrhynchos_8_32005216_32006064_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32005216 - 32006064

Intron Length:

849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTACA

5'SS Class:

major

3'SS Sequence:

TCTGTCTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTAAAT

U12 Branch Point Sequence:

TGACCAGTAAAT

Flanking Amino Acid:

MLTALHSYMDAHSPTALGLQ

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

73.3

37.4

Major BPS

58.4

0.21

1.2

38.7

Major PPT

81.7

0.71

0.8

31.6

Minor 5ss

34.8

-1.7

2.9

39.8

40.9

Minor BPS

45.1

-0.2

2.3

66.3

43.2

Associated Gene:

Gene:

LHX8

Ensembl Gene ID:

ENSAPLG00000012727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022093

31997571 - 32006141

8571

ENSAPLT00000013253

31997054 - 32006141

9088