Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_3211714_3215697_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3211714 - 3215697

Intron Length:

3984

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGGCCG

5'SS Class:

major

3'SS Sequence:

CCTTTTGTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GATGCTTTAATG

Flanking Amino Acid:

KKIIIKDGGTPQGIGSPSVY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

54.3

44.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

81.4

0.71

0.8

80.3

31.8

Minor 5ss

26.1

-2.7

3.1

31.8

42.1

Minor BPS

62.2

0.25

1.5

60.91

41.5

Associated Gene:

Gene:

MFSD14A

Ensembl Gene ID:

ENSAPLG00000014324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014993

3211565 - 3223751

12187