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Intron Name: Anas_platyrhynchos_platyrhynchos_8_32137418_32138516_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32137418 - 32138516

Intron Length:

1099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTTG

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTGAACT

Flanking Amino Acid:

QFADNTTYAKVITKLKILTP

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

41.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

46.5

-0.4

3.1

64.1

47.4

Minor BPS

0.74

1.6

90.08

33.4

Associated Gene:

Gene:

MSH4

Ensembl Gene ID:

ENSAPLG00000014286

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014895

32133904 - 32160686

26783