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Intron Name: Anas_platyrhynchos_platyrhynchos_8_32138625_32139742_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32138625 - 32139742

Intron Length:

1118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTGGT

5'SS Class:

major

3'SS Sequence:

CCCATCTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

AGCTTTTCAACC

Flanking Amino Acid:

LFGLITEHFKNVTFTTVQRK

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.2

67.1

44.6

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

0.63

0.8

71.1

33.1

Minor 5ss

38.6

-1.3

3.5

58.3

46.4

Minor BPS

55.1

0.14

1.5

61.07

38.4

Associated Gene:

Gene:

MSH4

Ensembl Gene ID:

ENSAPLG00000014286

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014895

32133904 - 32160686

26783