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Intron Name: Anas_platyrhynchos_platyrhynchos_8_32140641_32142574_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32140641 - 32142574

Intron Length:

1934

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTCGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATGTATT

Flanking Amino Acid:

LELVTNNRDSRNGHTLFGVL

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

81.2

32.8

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.4

1.2

71.2

38.9

Minor 5ss

37.5

-1.4

3.1

50.4

45.6

Minor BPS

0.01

2.1

73.96

42.7

Associated Gene:

Gene:

MSH4

Ensembl Gene ID:

ENSAPLG00000014286

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014895

32133904 - 32160686

26783