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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3227338_3227618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3227338 - 3227618

Intron Length:

281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCAGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

CTTTACTTAACC

Flanking Amino Acid:

NINPQCPVPKIQFNTQLSKM

Intron Amino Acid Position:

656

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

81.8

38.5

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

87.9

0.85

0.8

86.1

26.7

Minor 5ss

43.9

-0.7

3.2

65.5

45.8

Minor BPS

0.86

1.4

83.56

Associated Gene:

Gene:

SASS6

Ensembl Gene ID:

ENSAPLG00000014738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015409

3225703 - 3239173

13471

ENSAPLT00000030519

3226703 - 3239078

12376