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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3240470_3240577_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3240470 - 3240577

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TTTCCCTTAAAA

Flanking Amino Acid:

KDVAEIPEKQVTLSSLSKEE

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

74.2

36.1

Major BPS

0.3

62.3

30.4

Major PPT

69.7

0.44

1.1

71.9

31.6

Minor 5ss

32.3

-2

2.6

35.2

34.2

Minor BPS

80.4

0.95

1.2

86.76

30.7

Associated Gene:

Gene:

TRMT13

Ensembl Gene ID:

ENSAPLG00000014924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015569

3238955 - 3245890

6936