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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3241185_3242115_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3241185 - 3242115

Intron Length:

931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTATGTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TGGTTCATAAAT

Flanking Amino Acid:

ESAFKHLKQQASILGNMEKL

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

74.8

35.8

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

78.3

0.64

0.9

37.2

Minor 5ss

45.5

-0.5

3.1

65.3

46.1

Minor BPS

57.4

0.31

1.7

74.84

41.4

Associated Gene:

Gene:

TRMT13

Ensembl Gene ID:

ENSAPLG00000014924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015569

3238955 - 3245890

6936