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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3246795_3248002_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3246795 - 3248002

Intron Length:

1208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

AATGAACTGTCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

TTCCAATGAACT

Flanking Amino Acid:

PACMKQMTNLRFVNFRDNPL

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

56.8

0.15

1.1

52.4

46.1

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

49.4

0.03

1.9

73.17

42.7

Associated Gene:

Gene:

LRRC39

Ensembl Gene ID:

ENSAPLG00000014987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018086

3246617 - 3252140

5524

ENSAPLT00000015645

3242912 - 3252140

9229