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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3248665_3249080_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3248665 - 3249080

Intron Length:

416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTTGAGA

5'SS Class:

weak_major

3'SS Sequence:

TCTTCCTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

CTAGCATTAAAT

Flanking Amino Acid:

NRNICDLPPQLSELKKLSHV

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.3

0.22

1.2

56.3

42.1

Major BPS

73.5

0.58

79.3

29.4

Major PPT

0.81

0.6

84.9

22.7

Minor 5ss

34.1

-1.8

2.9

41.3

44.7

Minor BPS

53.9

0.2

1.9

71.4

44.9

Associated Gene:

Gene:

LRRC39

Ensembl Gene ID:

ENSAPLG00000014987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018086

3246617 - 3252140

5524

ENSAPLT00000015645

3242912 - 3252140

9229