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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3249218_3249762_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3249218 - 3249762

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGCTAT

5'SS Class:

major

3'SS Sequence:

ATGCTTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TGTTCTTTCATT

Flanking Amino Acid:

NSIESIPKEIGQLTSLQELL

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

0.9

72.8

34.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

79.4

0.66

0.9

73.7

36.2

Minor 5ss

40.2

-1.1

3.1

52.2

Minor BPS

0.65

1.7

84.22

37.1

Associated Gene:

Gene:

LRRC39

Ensembl Gene ID:

ENSAPLG00000014987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015645

3242912 - 3252140

9229

ENSAPLT00000018086

3246617 - 3252140

5524