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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3249920_3251002_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3249920 - 3251002

Intron Length:

1083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTGTTA

5'SS Class:

major

3'SS Sequence:

TTTCTTGTCTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAG

U12 Branch Point Sequence:

TTAAGCTGAATT

Flanking Amino Acid:

ILRIEEEEWKTLPSCLLKLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

68.5

38.9

Major BPS

67.8

0.44

1.5

75.9

36.3

Major PPT

80.9

0.7

0.8

80.7

31.3

Minor 5ss

-1.2

3.6

55.3

48.9

Minor BPS

53.8

0.2

1.9

74.73

41.9

Associated Gene:

Gene:

LRRC39

Ensembl Gene ID:

ENSAPLG00000014987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015645

3242912 - 3252140

9229

ENSAPLT00000018086

3246617 - 3252140

5524