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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3251109_3252027_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3251109 - 3252027

Intron Length:

919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGCAGG

5'SS Class:

major

3'SS Sequence:

CTTTCTGTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAG

U12 Branch Point Sequence:

AAACCCTGAAAG

Flanking Amino Acid:

ELRKEKEFRQRLLLVWEERA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.35

1.3

56.2

48.1

Major BPS

64.6

0.36

1.5

63.4

44.3

Major PPT

81.1

0.7

0.8

76.8

31.9

Minor 5ss

40.3

-1.1

2.6

49.3

46.6

Minor BPS

49.6

-0.1

1.6

52.69

40.6

Associated Gene:

Gene:

LRRC39

Ensembl Gene ID:

ENSAPLG00000014987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018086

3246617 - 3252140

5524

ENSAPLT00000015645

3242912 - 3252140

9229