Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_3261131_3261577_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3261131 - 3261577

Intron Length:

447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTCAT

5'SS Class:

strong_major

3'SS Sequence:

GAATATTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

TTTTCTTGGAGT

Flanking Amino Acid:

SGKDKTEPITGFHKAMVKTM

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

79.8

35.1

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

72.4

0.5

62.2

47.7

Minor 5ss

-1.6

50.1

46.1

Minor BPS

61.6

0.45

1.8

83.62

37.6

Associated Gene:

Gene:

DBT

Ensembl Gene ID:

ENSAPLG00000015138

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015801

3257473 - 3264985

7513