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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3270207_3271594_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3270207 - 3271594

Intron Length:

1388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTCTT

5'SS Class:

major

3'SS Sequence:

TAATCGCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TATCTTGTAATC

Flanking Amino Acid:

GTHIADTKTAGSVCLLMQVA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

74.4

41.9

Major BPS

84.4

0.85

1.1

34.5

Major PPT

70.4

0.46

0.9

66.8

Minor 5ss

45.8

-0.4

2.8

59.1

45.4

Minor BPS

49.7

-0

1.9

64.02

35.9

Associated Gene:

Gene:

RTCA

Ensembl Gene ID:

ENSAPLG00000015430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016118

3269285 - 3277062

7778