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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3271719_3272185_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3271719 - 3272185

Intron Length:

467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGGAAA

5'SS Class:

major

3'SS Sequence:

TGCTTGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTGTTTTTATAT

Flanking Amino Acid:

MAPQIDYTLMVFKPIVEKFN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

67.6

39.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.8

0.65

0.9

76.8

37.4

Minor 5ss

30.3

-2.3

3.3

35.3

43.5

Minor BPS

52.5

0.16

1.7

69.13

Associated Gene:

Gene:

RTCA

Ensembl Gene ID:

ENSAPLG00000015430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016118

3269285 - 3277062

7778