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Intron Name: Anas_platyrhynchos_platyrhynchos_8_335291_351910_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

335291 - 351910

Intron Length:

16620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TATCCTTTAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

77.7

33.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

86.5

0.82

0.6

85.7

21.5

Minor 5ss

40.1

-1.1

2.9

49.5

41.1

Minor BPS

74.8

0.76

1.1

77.04

32.4

Associated Gene:

Gene:

ZNF644

Ensembl Gene ID:

ENSAPLG00000013510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043550

319852 - 352954

33103

ENSAPLT00000020539

319852 - 352954

33103