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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3358596_3359540_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3358596 - 3359540

Intron Length:

945

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTTTTTT

5'SS Class:

weak_major

3'SS Sequence:

GTTTTCCATTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

GTGTTTTCCATT

Flanking Amino Acid:

FTTSSASNLKSVSINSRLAS

Intron Amino Acid Position:

495

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.44

1.2

74.5

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

80.9

0.69

0.9

78.5

35.1

Minor 5ss

48.6

-0.1

2.4

68.2

42.5

Minor BPS

46.2

-0.2

1.9

63.74

41.6

Associated Gene:

Gene:

CDC14A

Ensembl Gene ID:

ENSAPLG00000015528

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031819

3354155 - 3406863

52709

ENSAPLT00000016225

3349955 - 3406863

56909