Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_3385914_3390179_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3385914 - 3390179

Intron Length:

4266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TCCCCTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTCCCTCCATC

Flanking Amino Acid:

NAAFLIGAYAVIYLKKTPEE

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.3

75.7

40.1

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

71.3

0.48

0.8

31.6

Minor 5ss

40.2

-1.1

2.8

57.6

39.6

Minor BPS

54.8

0.13

72.19

39.1

Associated Gene:

Gene:

CDC14A

Ensembl Gene ID:

ENSAPLG00000015528

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031819

3354155 - 3406863

52709

ENSAPLT00000016225

3349955 - 3406863

56909