Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_3390273_3396491_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3390273 - 3396491

Intron Length:

6219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTAACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTAACA

Flanking Amino Acid:

YCCKLNKKLKYFSLSRKKIV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.3

32.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.4

0.77

0.9

81.3

34.8

Minor 5ss

48.4

-0.1

2.8

67.4

Minor BPS

81.2

0.98

83.95

29.4

Associated Gene:

Gene:

CDC14A

Ensembl Gene ID:

ENSAPLG00000015528

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031819

3354155 - 3406863

52709

ENSAPLT00000016225

3349955 - 3406863

56909