Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_3484579_3493010_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3484579 - 3493010

Intron Length:

8432

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCAGAAGGA

5'SS Class:

major

3'SS Sequence:

GGTTTTCACTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTCTACTAAAT

Flanking Amino Acid:

KGDVIMKSCRVSFCLSKAEY

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.4

0.29

1.2

53.8

39.6

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

61.1

0.25

1.1

64.9

40.7

Minor 5ss

17.6

-3.7

25.9

39.2

Minor BPS

49.3

0.03

76.9

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012274

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012787

3472863 - 3493893

21031