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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3892371_3892923_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3892371 - 3892923

Intron Length:

553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TATTCTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TATTTCTGGACT

Flanking Amino Acid:

QGSPGAKGDAGISGPAGPLG

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.3

32.8

Major BPS

79.1

0.72

69.3

38.4

Major PPT

81.8

0.72

0.7

81.3

30.3

Minor 5ss

37.2

-1.4

2.8

47.9

41.8

Minor BPS

69.7

0.7

1.4

84.59

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012650

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013547

3886373 - 3899012

12640