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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3908198_3911273_R

Intron Information:

Intron Rank:

134309

Intron Class:

major

Intron Phase:

Intron Coordinates:

3908198 - 3911273

Intron Length:

3076

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TACACATGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTATCCTTACAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

80.6

33.8

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

0.34

1.1

57.5

Minor 5ss

31.6

-2.1

39.4

46.1

Minor BPS

66.9

0.51

1.7

76.77

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038486

3906935 - 3911441

4507