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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3952106_3953872_R

Intron Information:

Intron Rank:

136606

Intron Class:

major

Intron Phase:

Intron Coordinates:

3952106 - 3953872

Intron Length:

1767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TCTTTTAAACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTCTTTTAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

74.7

35.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

69.2

0.43

64.6

40.5

Minor 5ss

38.9

-1.2

2.8

55.7

41.6

Minor BPS

68.8

0.57

1.3

76.65

32.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039040

3951719 - 3956080

4362