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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3953927_3954831_R

Intron Information:

Intron Rank:

136607

Intron Class:

major

Intron Phase:

Intron Coordinates:

3953927 - 3954831

Intron Length:

905

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTACTGCATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTAATCTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

81.2

26.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

69.2

0.43

67.1

39.3

Minor 5ss

42.2

-0.9

2.8

52.8

38.5

Minor BPS

67.7

0.55

1.4

74.32

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039040

3951719 - 3956080

4362