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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3957606_3960896_R

Intron Information:

Intron Rank:

133054

Intron Class:

major

Intron Phase:

Intron Coordinates:

3957606 - 3960896

Intron Length:

3291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTATTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

CTTTTCTTATTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

76.9

33.7

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

85.9

0.81

0.8

80.2

31.6

Minor 5ss

32.3

-2

2.9

32.2

42.1

Minor BPS

65.7

0.47

1.6

73.26

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018833

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036737

3957308 - 3961642

4335