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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3960951_3961509_R

Intron Information:

Intron Rank:

133055

Intron Class:

major

Intron Phase:

Intron Coordinates:

3960951 - 3961509

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

ATTTACTGAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

85.6

24.6

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

75.2

0.57

74.7

33.9

Minor 5ss

34.4

-1.8

2.8

41.8

44.8

Minor BPS

55.4

0.15

1.9

71.04

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018833

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036737

3957308 - 3961642

4335