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Intron Name: Anas_platyrhynchos_platyrhynchos_8_4005587_4007921_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4005587 - 4007921

Intron Length:

2335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TATGTTTTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTATGTTTTACT

Flanking Amino Acid:

LFRTVNIADGKWHRVAISVE

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.3

26.3

Major BPS

73.8

0.59

0.9

26.8

Major PPT

0.52

67.2

43.4

Minor 5ss

-1.4

3.3

49.4

41.3

Minor BPS

57.8

0.33

2.1

80.51

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039359

4003583 - 4015668

12086