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Intron Name: Anas_platyrhynchos_platyrhynchos_8_4160697_4161566_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4160697 - 4161566

Intron Length:

870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGGCG

5'SS Class:

major

3'SS Sequence:

GTTTGCTCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

TTCAATATGACT

Flanking Amino Acid:

VRVLADHGRLKHTAFATFPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

59.2

39.7

Major BPS

74.2

0.6

0.9

75.7

Major PPT

79.6

0.67

0.9

70.1

41.4

Minor 5ss

24.2

-3

3.3

26.6

37.9

Minor BPS

47.9

-0

1.8

69.82

Associated Gene:

Gene:

RNPC3

Ensembl Gene ID:

ENSAPLG00000015605

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016267

4160478 - 4175886

15409