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Intron Name: Anas_platyrhynchos_platyrhynchos_8_4161615_4162724_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4161615 - 4162724

Intron Length:

1110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTATA

5'SS Class:

major

3'SS Sequence:

TAATTACTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTTTCCATTATA

Flanking Amino Acid:

TFPSENAAAKALSRLHQLKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

80.9

32.8

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

0.36

1.1

65.5

39.9

Minor 5ss

41.8

-0.9

2.5

51.7

44.8

Minor BPS

63.8

0.43

1.9

80.49

34.8

Associated Gene:

Gene:

RNPC3

Ensembl Gene ID:

ENSAPLG00000015605

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016267

4160478 - 4175886

15409