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Intron Name: Anas_platyrhynchos_platyrhynchos_8_4165397_4166916_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4165397 - 4166916

Intron Length:

1520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACTTGT

5'SS Class:

major

3'SS Sequence:

TCCCCATATTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAA

U12 Branch Point Sequence:

CTCCCCATATTT

Flanking Amino Acid:

FGPITARPPMYEEYLPVPVP

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.2

71.5

41.1

Major BPS

61.4

0.28

1.1

67.9

34.4

Major PPT

68.4

0.41

0.9

66.2

33.7

Minor 5ss

47.6

-0.2

2.6

64.6

41.8

Minor BPS

48.1

-0

1.9

44.9

Associated Gene:

Gene:

RNPC3

Ensembl Gene ID:

ENSAPLG00000015605

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016267

4160478 - 4175886

15409