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Intron Name: Anas_platyrhynchos_platyrhynchos_8_4171115_4172165_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

4171115 - 4172165

Intron Length:

1051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTATCTTTT

5'SS Class:

strong_minor

3'SS Sequence:

AACAGAATCCCAG|C

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TGGTCCTTAACA

Flanking Amino Acid:

YVLFEKPMVVQFARSARPKQ

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.7

0.18

1.2

66.2

39.9

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

53.1

0.07

40.6

Minor 5ss

86.1

1.21

1.3

89.7

22.4

Minor BPS

84.7

1.08

1.1

84.38

35.6

Associated Gene:

Gene:

RNPC3

Ensembl Gene ID:

ENSAPLG00000015605

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016267

4160478 - 4175886

15409