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Intron Name: Anas_platyrhynchos_platyrhynchos_8_4180969_4182394_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4180969 - 4182394

Intron Length:

1426

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACCT

5'SS Class:

strong_major

3'SS Sequence:

AATTTTCATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CATTTCGGAATT

Flanking Amino Acid:

DIENYHDASQVRNCRLVNLL

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.4

38.4

Major BPS

100

1.24

0.5

100

Major PPT

76.6

0.6

70.4

39.5

Minor 5ss

-1.8

3.3

49.1

46.6

Minor BPS

48.5

-0

2.1

69.18

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015681

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016383

4179330 - 4182718

3389