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Intron Name: Anas_platyrhynchos_platyrhynchos_8_4286828_4289049_F

Intron Information:

Intron Rank:

125973

Intron Class:

major

Intron Phase:

Intron Coordinates:

4286828 - 4289049

Intron Length:

2222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTCACCATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTTCACCATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

77.4

37.4

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

77.8

0.62

0.9

74.1

35.1

Minor 5ss

39.3

-1.2

56.4

40.7

Minor BPS

45.5

-0.2

2.3

74.5

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039511

4277474 - 4289284

11811

ENSAPLT00000033687

4266232 - 4289284

23053