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Intron Name: Anas_platyrhynchos_platyrhynchos_8_431175_432287_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

431175 - 432287

Intron Length:

1113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCTT

5'SS Class:

strong_major

3'SS Sequence:

CATTTGTTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTTTCTATATCA

Flanking Amino Acid:

LPKYELDIEQLPKYSDTLAE

Intron Amino Acid Position:

628

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

75.3

40.4

Major BPS

89.7

0.98

0.7

89.9

Major PPT

77.6

0.62

0.9

69.5

41.3

Minor 5ss

36.8

-1.5

3.5

56.4

47.8

Minor BPS

62.9

0.4

1.9

80.19

35.7

Associated Gene:

Gene:

HFM1

Ensembl Gene ID:

ENSAPLG00000013639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014234

430122 - 486715

56594