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Intron Name: Anas_platyrhynchos_platyrhynchos_8_434128_436207_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

434128 - 436207

Intron Length:

2080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTACC

5'SS Class:

major

3'SS Sequence:

ACCTAATTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

TCCAACCTAATT

Flanking Amino Acid:

LHVSKQLEKIDLFYCSYGIM

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

71.5

38.5

Major BPS

73.1

0.57

71.9

31.3

Major PPT

74.3

0.55

0.9

69.8

39.7

Minor 5ss

35.7

-1.6

2.9

43.1

38.2

Minor BPS

48.5

-0

1.9

66.26

44.4

Associated Gene:

Gene:

HFM1

Ensembl Gene ID:

ENSAPLG00000013639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014234

430122 - 486715

56594