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Intron Name: Anas_platyrhynchos_platyrhynchos_8_444382_444472_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

444382 - 444472

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATATA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTACTATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

ATTGTTTTACTA

Flanking Amino Acid:

ANSLKDSKLRDLLMYGVAYH

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

89.5

23.2

Major BPS

76.9

0.67

66.3

40.4

Major PPT

77.1

0.61

75.6

38.4

Minor 5ss

38.7

-1.3

2.9

50.9

45.5

Minor BPS

52.5

0.07

1.6

64.17

37.3

Associated Gene:

Gene:

HFM1

Ensembl Gene ID:

ENSAPLG00000013639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014234

430122 - 486715

56594