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Intron Name: Anas_platyrhynchos_platyrhynchos_8_446101_446231_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

446101 - 446231

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

AAATTCCTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTTTTAAAATT

Flanking Amino Acid:

QLVRLFLIDEVHVIKDESRG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.9

76.9

33.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

61.9

0.27

56.3

38.9

Minor 5ss

22.5

-3.2

3.6

30.6

42.8

Minor BPS

49.5

0.04

1.9

72.64

38.9

Associated Gene:

Gene:

HFM1

Ensembl Gene ID:

ENSAPLG00000013639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014234

430122 - 486715

56594