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Intron Name: Anas_platyrhynchos_platyrhynchos_8_446310_483618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

446310 - 483618

Intron Length:

37309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTTTTTTATCT

Flanking Amino Acid:

MFPAQIEEKWDSMTRRW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

75.1

35.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.1

0.81

0.7

81.8

29.8

Minor 5ss

30.7

-2.2

3.7

46.1

49.1

Minor BPS

67.6

0.63

1.6

82.72

39.3

Associated Gene:

Gene:

HFM1

Ensembl Gene ID:

ENSAPLG00000013639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014234

430122 - 486715

56594