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Intron Name: Anas_platyrhynchos_platyrhynchos_8_4601073_4617306_R

Intron Information:

Intron Rank:

129760

Intron Class:

major

Intron Phase:

Intron Coordinates:

4601073 - 4617306

Intron Length:

16234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCTAT

U12 Branch Point Sequence:

TTTCTTCCAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

85.3

25.4

Major BPS

61.2

0.28

1.4

60.7

45.4

Major PPT

86.5

0.82

0.7

85.9

28.3

Minor 5ss

37.5

-1.4

2.8

46.9

41.8

Minor BPS

52.3

0.15

1.9

78.16

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026333

4599221 - 4617593

18373

ENSAPLT00000023687

4600815 - 4617593

16779