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Intron Name: Anas_platyrhynchos_platyrhynchos_8_483741_483822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

483741 - 483822

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAATCAA

5'SS Class:

strong_major

3'SS Sequence:

AACCTCTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TAGCTATTAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

72.6

33.8

Major BPS

81.9

0.79

0.8

81.9

Major PPT

66.7

0.38

0.8

58.2

37.4

Minor 5ss

27.4

-2.6

2.8

31.6

42.6

Minor BPS

58.4

0.24

1.6

66.15

38.9

Associated Gene:

Gene:

HFM1

Ensembl Gene ID:

ENSAPLG00000013639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014234

430122 - 486715

56594