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Intron Name: Anas_platyrhynchos_platyrhynchos_8_483981_485981_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

483981 - 485981

Intron Length:

2001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GCGTTATCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

AACTGCTGAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

76.6

31.9

Major BPS

0.42

1.1

57.3

41.7

Major PPT

68.1

0.41

0.9

59.1

42.1

Minor 5ss

-1.6

3.2

49.9

46.5

Minor BPS

0.27

1.9

72.62

43.8

Associated Gene:

Gene:

HFM1

Ensembl Gene ID:

ENSAPLG00000013639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014234

430122 - 486715

56594