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Intron Name: Anas_platyrhynchos_platyrhynchos_8_4893306_4903073_R

Intron Information:

Intron Rank:

129425

Intron Class:

major

Intron Phase:

Intron Coordinates:

4893306 - 4903073

Intron Length:

9768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTAATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

GCAAACTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

68.5

36.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

83.6

0.76

0.8

80.6

36.5

Minor 5ss

29.6

-2.3

3.5

35.6

42.2

Minor BPS

57.3

0.31

1.6

67.65

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027287

4852009 - 4931894

79886