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Intron Name: Anas_platyrhynchos_platyrhynchos_8_4913902_4916469_R

Intron Information:

Intron Rank:

129427

Intron Class:

major

Intron Phase:

Intron Coordinates:

4913902 - 4916469

Intron Length:

2568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

AACACTTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

AAATATTTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

78.8

38.3

Major BPS

100

1.24

0.5

100

Major PPT

72.7

0.51

0.9

64.9

40.3

Minor 5ss

45.6

-0.5

2.9

46.2

Minor BPS

64.8

0.46

1.4

69.23

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027287

4852009 - 4931894

79886