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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5110421_5111718_R

Intron Information:

Intron Rank:

134152

Intron Class:

major

Intron Phase:

Intron Coordinates:

5110421 - 5111718

Intron Length:

1298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTGGCTATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTTCACCATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

0.5

62.2

43.2

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

47.2

-0.1

2.3

78.75

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019452

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035306

5109680 - 5115136

5457