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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5133949_5140892_R

Intron Information:

Intron Rank:

137341

Intron Class:

major

Intron Phase:

Intron Coordinates:

5133949 - 5140892

Intron Length:

6944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTATGTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTCAG

U12 Branch Point Sequence:

AGTGCTGTATGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

50.5

0.01

1.6

63.4

44.3

Major PPT

75.8

0.58

45.2

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

40.2

-0.6

2.3

58.13

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044690

5133753 - 5140975

7223